Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs6601574 | chr8:11094885 | G/A | SGK223 | chr8:8175258-8244008:- | 0.33 | 6.5 | 1.99E-10 | Box Plot |
| THCA | rs6601575 | chr8:11097804 | A/C | SGK223 | chr8:8175258-8244008:- | -0.37 | -7.2 | 2.31E-12 | Box Plot |
| THCA | rs6601576 | chr8:11100275 | A/T | SGK223 | chr8:8175258-8244008:- | 0.34 | 6.36 | 4.81E-10 | Box Plot |
| THCA | rs6601577 | chr8:11102682 | C/G | SGK223 | chr8:8175258-8244008:- | -0.31 | -5.99 | 4.01E-9 | Box Plot |
| THCA | rs6601580 | chr8:11193736 | T/G | SGK223 | chr8:8175258-8244008:- | -0.35 | -6.71 | 5.59E-11 | Box Plot |
| THCA | rs6601581 | chr8:11197598 | T/C | SGK223 | chr8:8175258-8244008:- | -0.36 | -6.8 | 3.05E-11 | Box Plot |
| THCA | rs6601582 | chr8:11207367 | C/A | SGK223 | chr8:8175258-8244008:- | -0.4 | -7.45 | 4.51E-13 | Box Plot |
| THCA | rs6601584 | chr8:11232343 | C/G | SGK223 | chr8:8175258-8244008:- | 0.46 | 9.01 | 4.81E-18 | Box Plot |
| THCA | rs6601585 | chr8:11233659 | A/G | SGK223 | chr8:8175258-8244008:- | 0.47 | 9.23 | 8.5E-19 | Box Plot |
| THCA | rs6601633 | chr8:11805173 | C/T | SGK223 | chr8:8175258-8244008:- | 0.46 | 8.7 | 5.36E-17 | Box Plot |
| THCA | rs6601634 | chr8:11806456 | T/C | SGK223 | chr8:8175258-8244008:- | 0.38 | 6.97 | 1.08E-11 | Box Plot |
| THCA | rs6601644 | chr8:11847078 | G/A | SGK223 | chr8:8175258-8244008:- | -0.44 | -8.56 | 1.56E-16 | Box Plot |
| THCA | rs6601649 | chr8:11857317 | A/G | SGK223 | chr8:8175258-8244008:- | 0.37 | 6.66 | 7.39E-11 | Box Plot |
| THCA | rs660439 | chr11:49231060 | A/G | FOLH1B | chr11:89372395-89431886:+ | 0.49 | 7.95 | 1.38E-14 | Box Plot |
| THCA | rs660476 | chr11:49231026 | C/T | FOLH1B | chr11:89372395-89431886:+ | 0.49 | 7.95 | 1.38E-14 | Box Plot |